Co-expression analysis

Gene ID 1608305_at
Gene name hypothetical protein LOC100258034
Homology with ArabidopsisSimilar to At3g23090: - (HF=5e-3)
Module size 8 genes
NF 0.23
%ile 33.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.00.951608305_atCF415367hypothetical protein LOC100258034-5e-3At3g23090-O.I.H.G.S.X.
0.3650.70.971614663_atCD800310hypothetical protein LOC100252340-2e-5At1g11680CYP51G1 (CYTOCHROME P450 51G1)O.I.H.G.S.X.
0.3548.50.961619172_atCD799360hypothetical protein LOC100264449-1e-85At1g50380prolyl oligopeptidase family proteinO.I.H.G.S.X.
0.3039.40.971620282_atCB977969hypothetical protein LOC100243325-5e+0At5g13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.2632.00.971618858_atCB972840hypothetical LOC100253454-5e+0At5g48543LCR1 (Low-molecular-weight cysteine-rich 1)O.I.H.G.S.X.
0.1515.60.971615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.099.40.971617299_atCD801559hypothetical protein LOC100249941-3e-31At2g46225ABIL1 (Abi-1-like 1)O.I.H.G.S.X.
0.088.50.961614958_atCB347627hypothetical protein LOC100241674-2e-6At5g130505-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.199.4GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
7.599.2GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
6.799.0GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.998.6GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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