Co-expression analysis

Gene ID 1608211_at
Gene name hypothetical protein LOC100247578
Homology with ArabidopsisSimilar to At3g55490: - (HF=6e+0)
Module size 9 genes
NF 0.48
%ile 72.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.961608211_atCD798213hypothetical protein LOC100247578-6e+0At3g55490-O.I.H.G.S.X.
0.5779.80.971617552_atCF202269.1hypothetical protein LOC100243817-4e-35At4g35020ARAC3 (ARABIDOPSIS RAC-LIKE 3)O.I.H.G.S.X.
0.5072.70.981607612_atCF202447.1hypothetical protein LOC100262044-2e-12At4g31300PBA1O.I.H.G.S.X.
0.4666.50.971611129_s_atCB005644hypothetical protein LOC100261235-2e+0At2g06200AtGRF6 (GROWTH-REGULATING FACTOR 6)O.I.H.G.S.X.
0.4464.10.961618230_atCD801769hypothetical protein LOC100245789-2e+0At4g21090adrenodoxin-like ferredoxin 1O.I.H.G.S.X.
0.4464.10.971621019_atCF201902.1--1e+0At5g65360histone H3O.I.H.G.S.X.
0.4260.10.971609018_atCF204139.1--1e+0At3g44580unknown proteinO.I.H.G.S.X.
0.4260.10.971612717_s_atCA814430hypothetical protein LOC100259033-1e+0At1g01225NC domain-containing protein-relatedO.I.H.G.S.X.
0.3853.60.961611253_atCD798640--2e-1At1g75060unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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