Co-expression analysis

Gene ID 1608191_at
Gene name hypothetical protein LOC100245911
Homology with ArabidopsisSimilar to At2g39700: ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) (HF=4e-20)
Module size 7 genes
NF 0.70
%ile 94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.961608191_atCD798831hypothetical protein LOC100245911-4e-20At2g39700ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)O.I.H.G.S.X.
0.8394.60.971610683_atCF214265hypothetical protein LOC100264093-2e-6At5g67260CYCD3O.I.H.G.S.X.
0.6787.90.961606471_atCF372161hypothetical protein LOC100244589-3e-6At5g07030aspartic-type endopeptidaseO.I.H.G.S.X.
0.6787.90.971611378_atCF606069hypothetical protein LOC100244478-2e-8At1g60630leucine-rich repeat family proteinO.I.H.G.S.X.
0.6081.90.971617440_atCF373136hypothetical protein LOC100247017-8e-2At5g61470zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.6081.90.971620766_atCF609305hypothetical protein LOC100249220-9e-18At1g23000heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5779.80.961618871_atCF510551hypothetical protein LOC100265907-3e-7At4g38660thaumatin, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.299.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.398.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
1.886.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.886.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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