Co-expression analysis

Gene ID 1608159_at
Gene name hypothetical protein LOC100242214
Homology with ArabidopsisSimilar to At4g11410: short-chain dehydrogenase/reductase (SDR) family protein (HF=8e-14)
Module size 7 genes
NF 0.65
%ile 91.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.30.871608159_atCB969766hypothetical protein LOC100242214-8e-14At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8093.60.891614972_atCB969853hypothetical protein LOC100242214-7e-5At4g23420short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.7189.50.871613922_s_atCA809290hypothetical protein LOC100249812-1e+0At3g22970unknown proteinO.I.H.G.S.X.
0.6384.30.881607880_atBQ793902hypothetical protein LOC100263570-4e-2At2g02800APK2B (PROTEIN KINASE 2B)O.I.H.G.S.X.
0.5779.80.871610941_atCD714898--1e-11At1g64950CYP89A5O.I.H.G.S.X.
0.4868.80.871620883_atCA812348--4e-41Atcg01250-O.I.H.G.S.X.
0.4464.10.871617293_s_atBQ792635hypothetical protein LOC100254983-1e+0At2g40530unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.491.3GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.390.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.390.7GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.289.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.189.1GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.189.1GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
2.189.1GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.088.2GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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