Co-expression analysis

Gene ID	1608155_at
Gene name	hypothetical protein LOC100252195
Homology with Arabidopsis	Similar to At4g34460: AGB1 (GTP BINDING PROTEIN BETA 1) (HF=1e-31)
Module size	6 genes
NF	0.62
%ile	88.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.98	1608155_at	CF210980	hypothetical protein LOC100252195	-	1e-31	At4g34460	AGB1 (GTP BINDING PROTEIN BETA 1)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1621546_at	CF204967.1	hypothetical protein LOC100263158	-	6e-6	At4g10710	SPT16 (global transcription factor C)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1611180_at	BQ795485	hypothetical protein LOC100263350	-	5e+0	At3g28455	CLE25 (CLAVATA3/ESR-RELATED 25)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1611974_at	CF208396	hypothetical protein LOC100258926	-	9e-27	At2g15430	NRPB3	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1608789_at	CF207355	hypothetical protein LOC100258912	-	2e-16	At2g47070	SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1607823_s_at	CF405744	hypothetical protein LOC100263158	-	1e+0	At5g59000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
3.0	94.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.6	92.5	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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