Co-expression analysis

Gene ID 1608127_s_at
Gene name similar to putative mitogen-activated protein kinase kinase
Homology with ArabidopsisSimilar to At4g26070: MEK1 (MAP KINASE/ ERK KINASE 1) (HF=6e-13)
Module size 6 genes
NF 0.20
%ile 29.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.971608127_s_atAY395740.1similar to putative mitogen-activated protein kinase kinase-6e-13At4g26070MEK1 (MAP KINASE/ ERK KINASE 1)O.I.H.G.S.X.
0.2937.70.981619392_atCF513478hypothetical protein LOC100259847-4e+0At3g24060self-incompatibility protein-relatedO.I.H.G.S.X.
0.2327.50.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.1616.70.971614268_atCB969230hypothetical protein LOC100260812-1e+0At2g20825ULT2 (ULTRAPETALA 2)O.I.H.G.S.X.
0.1616.70.981620627_atCF214379hypothetical protein LOC100259195-1e-22At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.1111.30.971615811_a_atCF214981hypothetical protein LOC100240940-4e-86At3g16630KINESIN-13AO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.1GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.595.7GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.189.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.088.2GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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