Co-expression analysis

Gene ID 1608020_at
Gene name
Homology with ArabidopsisSimilar to At5g19890: peroxidase, putative (HF=4e+0)
Module size 6 genes
NF 0.02
%ile 4.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.881608020_atCB981965--4e+0At5g19890peroxidase, putativeO.I.H.G.S.X.
0.056.00.971622789_x_atCF206467.1--4e+1At5g53590auxin-responsive family proteinO.I.H.G.S.X.
0.034.20.941619931_s_atCB349799hypothetical LOC100246843-7e-130At5g56000heat shock protein 81-4 (HSP81-4)O.I.H.G.S.X.
0.034.20.971608374_atCF214105--3e-1At4g03153kinase interacting family proteinO.I.H.G.S.X.
0.023.20.961607928_atCF201793.1--5e-3At4g08230glycine-rich proteinO.I.H.G.S.X.
0.012.10.961622370_s_atCD715953hypothetical protein LOC100241279-5e+0At5g07572unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.896.4GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.796.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
3.194.6GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.094.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.893.4GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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