Co-expression analysis

Gene ID	1607952_at
Gene name	hypothetical protein LOC100250523
Homology with Arabidopsis	Similar to At1g28440: HSL1 (HAESA-Like 1) (HF=3e-8)
Module size	6 genes
NF	0.25
%ile	35.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.96	1607952_at	CF372631	hypothetical protein LOC100250523	-	3e-8	At1g28440	HSL1 (HAESA-Like 1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1610187_a_at	CF518775	hypothetical protein LOC100246179	-	2e-13	At3g50650	scarecrow-like transcription factor 7 (SCL7)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1609573_at	CB973015	hypothetical protein LOC100264499	-	1e+0	At3g50450	HR1 (HOMOLOG OF RPW8 1)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1608236_at	CF209492	hypothetical protein LOC100258055	-	5e-9	At2g47900	AtTLP3 (TUBBY LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.94	1615524_at	CA810708	MADS-box protein	-	7e-5	At2g45660	AGL20 (AGAMOUS-LIKE 20)	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.94	1617942_at	CF513248	-	-	1e+0	At4g19830	immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.9	93.8	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.7	93.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.6	92.5	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
2.6	92.5	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.2	89.9	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.2	89.9	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.1	89.1	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
2.1	89.1	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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