Co-expression analysis

Gene ID 1607923_at
Gene name hypothetical protein LOC100245744
Homology with ArabidopsisSimilar to At5g50690: AtHSD7 (hydroxysteroid dehydrogenase 7) (HF=4e-1)
Module size 6 genes
NF 0.27
%ile 37.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.971607923_atCA816873hypothetical protein LOC100245744-4e-1At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.H.G.S.X.
0.5072.70.981618446_atCB969242hypothetical protein LOC100253086-1e-85At5g63890ATHDH (HISTIDINOL DEHYDROGENASE)O.I.H.G.S.X.
0.3650.70.981621147_s_atCF415138hypothetical protein LOC100247531-7e-1At5g14530transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2734.00.971620532_atCB004638hypothetical protein LOC100240981-2e-43At5g13610unknown proteinO.I.H.G.S.X.
0.2022.40.971606592_atCB922083hypothetical protein LOC100254130-8e-3At3g18165MOS4 (Modifier of snc1,4)O.I.H.G.S.X.
0.1515.60.971610720_atCF214229hypothetical protein LOC100243517-2e-15At5g53800unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.395.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.491.3GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.289.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.189.1GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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