Co-expression analysis

Gene ID	1607903_at
Gene name	hypothetical protein LOC100267377
Homology with Arabidopsis	Similar to At1g67670: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.57
%ile	84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.94	1607903_at	CF608166	hypothetical protein LOC100267377	-	1e+0	At1g67670	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.97	1618559_at	CF515423	hypothetical protein LOC100243779	-	2e-5	At1g44910	protein binding	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1612822_at	CF513105	hypothetical protein LOC100251960	-	4e-2	At1g09645	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1619653_at	CF517251	hypothetical LOC100246762	-	1e+0	At5g57170	macrophage migration inhibitory factor family protein / MIF family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1611443_at	CA818502	-	-	9e-1	At1g77885	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1613909_at	CF216082	hypothetical protein LOC100257282	-	1e+0	At2g44870	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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