Co-expression analysis

Gene ID	1607887_at
Gene name	hypothetical protein LOC100241008
Homology with Arabidopsis	Similar to At5g50880: unknown protein (HF=2e+0)
Module size	9 genes
NF	0.66
%ile	91.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.99	1607887_at	CF215963	hypothetical protein LOC100241008	-	2e+0	At5g50880	unknown protein	O.I.	H.G.	S.X.	Please select
0.74	91.0	0.99	1620790_at	CF515444	hypothetical protein LOC100249710	-	5e-4	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.99	1612293_at	CB346119	hypothetical protein LOC100264912	-	1e-65	At4g09000	14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.99	1611412_at	CF517248	hypothetical protein LOC100244694	-	2e+0	At5g37480	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1606368_s_at	CF208516	actin 1	-	0	At5g09810	ACT7 (ACTIN 7)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	AFFX-Vvi-actin-3_s_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.99	1611228_a_at	CB922630	hypothetical protein LOC100257366	-	2e+0	At3g60260	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.99	1618130_at	CF511795	hypothetical protein LOC100261654	-	1e+0	At5g23040	CDF1 (CELL GROWTH DEFECT FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1618690_at	CF207597	hypothetical protein LOC100259195	-	3e-16	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.7	84.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.7	84.7	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.6	83.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.6	83.3	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.6	83.3	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.5	81.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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