Co-expression analysis

Gene ID	1607848_at
Gene name	hypothetical protein LOC100248102
Homology with Arabidopsis	Similar to At4g29530: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase family (HF=1e+0)
Module size	6 genes
NF	0.15
%ile	23.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.83	1607848_at	CB339435	hypothetical protein LOC100248102	-	1e+0	At4g29530	2,3-diketo-5-methylthio-1-phosphopentane phosphatase family	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.87	1621517_s_at	CF204966.1	hypothetical protein LOC100250066	-	2e-2	At1g62760	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.89	1620413_at	CF373042	-	-	1e+0	At1g62510	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.81	1615714_at	CF201075.1	-	-	3e-4	At1g07250	UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.85	1614117_at	CF200679.1	-	-	4e-4	At1g61890	MATE efflux family protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.80	1615548_at	CA809748	-	-	2e-2	At5g26805	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.8	86.0	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
1.8	86.0	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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