Co-expression analysis

Gene ID	1607792_at
Gene name	hypothetical protein LOC100250805
Homology with Arabidopsis	Similar to At1g10717: - (HF=1e+0)
Module size	6 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.96	1607792_at	CF214419	hypothetical protein LOC100250805	-	1e+0	At1g10717	-	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.96	1610096_at	CF212486	hypothetical protein LOC100267358	-	1e-43	At5g59970	histone H4	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.96	1614824_at	CF373545	hypothetical protein LOC100245175	-	9e-1	At1g78170	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.96	1614219_at	CF413920	similar to predicted protein	-	3e-47	At5g10400	histone H3	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1614831_at	CF209966	hypothetical protein LOC100243109	-	7e-8	At5g48600	ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.96	1611934_at	CD717221	hypothetical protein LOC100252100	-	3e-1	At1g80740	CMT1 (CHROMOMETHYLASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.9	87.2	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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