Co-expression analysis

Gene ID 1607773_at
Gene name
Homology with ArabidopsisSimilar to At5g07290: AML4 (ARABIDOPSIS MEI2-LIKE 4) (HF=2e-30)
Module size 7 genes
NF 0.20
%ile 29.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.951607773_atCD719602--2e-30At5g07290AML4 (ARABIDOPSIS MEI2-LIKE 4)O.I.H.G.S.X.
0.3548.50.941618102_atCF415084--7e-37At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.
0.3345.70.951615204_atCF371804--1e+0At3g21580cobalt ion transmembrane transporterO.I.H.G.S.X.
0.2225.60.951619188_atCF204375.1--2e+0At1g48940plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.2225.60.941614328_atCF205824.1--1e+0At2g03640nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1313.30.951621037_atCB980438--5e+0At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)O.I.H.G.S.X.
0.088.50.951609587_atCF202068.1--5e-9At1g32220binding / catalytic/ coenzyme bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.198.1GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.997.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.697.6GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.996.6GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.996.6GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.886.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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