Co-expression analysis

Gene ID 1607753_at
Gene name hypothetical protein LOC100263239
Homology with ArabidopsisSimilar to At1g65230: unknown protein (HF=1e-6)
Module size 22 genes
NF 0.56
%ile 82.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8795.20.971607753_atCA816321hypothetical protein LOC100263239-1e-6At1g65230unknown proteinO.I.H.G.S.X.
0.7892.60.971622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.7390.80.971618636_atCB976802hypothetical protein LOC100261289-0At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.6384.30.981615926_atCA816891hypothetical protein LOC100264263-4e-7At3g15360TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)O.I.H.G.S.X.
0.6384.30.981617382_s_atBQ799139hypothetical protein LOC100262344-6e-174At1g68010HPRO.I.H.G.S.X.
0.6283.30.971611267_atCB346360similar to HDA14 (histone deacetylase 14); histone deacetylase-1e-16At4g33470hda14 (histone deacetylase 14)O.I.H.G.S.X.
0.6081.90.971619987_atCB910180hypothetical protein LOC100256191-9e-17At1g64860SIGA (SIGMA FACTOR A)O.I.H.G.S.X.
0.6081.90.981622065_atCD801714hypothetical protein LOC100240924-1e-27At3g54050fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.6081.90.971609923_atCB341249hypothetical protein LOC100244701-2e-27At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.5879.80.971618284_atCF516397hypothetical protein LOC100260169-8e-39At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.
0.5879.80.981613102_s_atCA809430hypothetical protein LOC100244092-6e-91At1g32060PRK (PHOSPHORIBULOKINASE)O.I.H.G.S.X.
0.5879.80.971619067_atCB339465hypothetical protein LOC100259429-8e-27At1g70760CRR23 ((chlororespiratory reduction 23)O.I.H.G.S.X.
0.5679.40.971616002_s_atCB345569hypothetical protein LOC100262354-2e-100At2g21330fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.5173.20.981620292_atCA817018hypothetical protein LOC100264686-3e-1At2g45434unknown proteinO.I.H.G.S.X.
0.4969.30.971611238_atCD799234hypothetical protein LOC100263239-5e-6At1g65230unknown proteinO.I.H.G.S.X.
0.4868.80.971607961_atCF415716hypothetical protein LOC100265352-3e-1At5g54680ILR3 (iaa-leucine resistant3)O.I.H.G.S.X.
0.4666.50.981622715_s_atCA809281hypothetical protein LOC100246378-3e-68At1g12900GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)O.I.H.G.S.X.
0.4464.10.971617428_atCB344473hypothetical protein LOC100259814-7e-57At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.H.G.S.X.
0.4464.10.981613167_s_atCA817855hypothetical protein LOC100260169-9e-18At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.H.G.S.X.
0.4361.50.981613585_atCB003255hypothetical protein LOC100244633-9e-8At4g12830hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4361.50.971615602_atCF414071hypothetical protein LOC100264091-1e-27At4g04640ATPC1O.I.H.G.S.X.
0.3751.70.971611324_atCB348704hypothetical protein LOC100263597-4e-7At1g14345oxidoreductaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.784.7GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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