Co-expression analysis

Gene ID 1607723_at
Gene name
Homology with ArabidopsisSimilar to At3g06720: IMPA-1 (IMPORTIN ALPHA ISOFORM 1) (HF=5e-18)
Module size 15 genes
NF 0.33
%ile 48.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.931607723_atCF568821--5e-18At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.4666.50.961609123_atCF215118hypothetical protein LOC100259150-2e-55At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.
0.4666.50.951617721_atCF568847--1e-76At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)O.I.H.G.S.X.
0.4464.10.951616784_atCD007778--5e-45At3g19640magnesium transporter CorA-like family protein (MRS2-3)O.I.H.G.S.X.
0.3548.50.961613291_atCF972323.1--4e-4At3g13410unknown proteinO.I.H.G.S.X.
0.3345.70.961607789_atCF604176hypothetical protein LOC100258188-7e+0At1g76460RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3243.10.961618060_atCF513542hypothetical protein LOC100252303-5e-41At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3141.30.951609051_atCA818195--4e-32At5g47730SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putativeO.I.H.G.S.X.
0.2837.70.961607649_atCB971586--4e-1At2g37570SLT1 (sodium- and lithium-tolerant 1)O.I.H.G.S.X.
0.2428.70.951620813_atBQ800573hypothetical protein LOC100245718-2e-8At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2327.50.971613284_s_atCF607046hypothetical protein LOC100261107-6e-1At4g31030unknown proteinO.I.H.G.S.X.
0.2225.60.961609077_atCF606671hypothetical protein LOC100264912-3e-13At5g16050GRF5 (GENERAL REGULATORY FACTOR 5)O.I.H.G.S.X.
0.2124.00.971618216_atCF415755hypothetical protein LOC100259302-5e-47At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)O.I.H.G.S.X.
0.2022.40.961621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.1819.40.971611833_atCB005444hypothetical protein LOC100256245-5e+0At2g01590CRR3 (CHLORORESPIRATORY REDUCTION 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.591.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.491.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
1.987.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
1.886.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage