Co-expression analysis

Gene ID 1607695_at
Gene name
Homology with ArabidopsisSimilar to At1g15880: GOS11 (golgi snare 11) (HF=2e-9)
Module size 6 genes
NF 0.43
%ile 64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.951607695_atCF208550--2e-9At1g15880GOS11 (golgi snare 11)O.I.H.G.S.X.
0.6787.90.961617825_s_atCF205420.1--3e-23At1g15880GOS11 (golgi snare 11)O.I.H.G.S.X.
0.6183.20.961621710_atCF201680.1--3e-1At1g59690-O.I.H.G.S.X.
0.3853.60.961613156_atCF209286hypothetical protein LOC100247989-6e-5At1g53400unknown proteinO.I.H.G.S.X.
0.3345.70.961607563_atCF203757.1--7e-49At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.2225.60.961617872_s_atCF404326hypothetical protein LOC100257528-1e-66At3g04600tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.1GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.196.9GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.793.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.793.0GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.491.3GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.390.7GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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