Co-expression analysis

Gene ID	1607681_at
Gene name	hypothetical protein LOC100257925
Homology with Arabidopsis	Similar to At5g43370: APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) (HF=5e-28)
Module size	6 genes
NF	0.30
%ile	43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.96	1607681_at	CD802479	hypothetical protein LOC100257925	-	5e-28	At5g43370	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.94	1616083_at	CB009608	hypothetical protein LOC100263644	-	6e-39	At1g11260	STP1 (SUGAR TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1619161_at	CD802334	hypothetical protein LOC100262369	-	4e-3	At3g15300	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.94	1613324_at	CB971883	hypothetical protein LOC100246997	-	4e-54	At1g53440	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.95	1617153_at	CF516521	hypothetical protein LOC100260369	-	2e+0	At2g32360	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.95	1615362_s_at	BQ799459	hypothetical protein LOC100260441	-	3e-27	At4g01370	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.8	93.4	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.3	90.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.2	89.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.1	89.1	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.1	89.1	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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