Co-expression analysis

Gene ID 1607646_at
Gene name hypothetical protein LOC100244584
Homology with ArabidopsisSimilar to At3g49870: ATARLA1C (ADP-ribosylation factor-like A1C) (HF=7e-59)
Module size 19 genes
NF 0.41
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8494.80.971607646_atCB977484hypothetical protein LOC100244584-7e-59At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.5679.40.981609620_atCB979452--7e+0At5g51845-O.I.H.G.S.X.
0.5173.20.981621288_atCB972014hypothetical protein LOC100252015-2e+0At5g50030invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4666.50.981607743_atCF513620hypothetical protein LOC100252303-5e-12At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.4666.50.981619148_atCF513297hypothetical protein LOC100263958-6e-2At3g12130KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.4464.10.981613730_atCB036143hypothetical protein LOC100264670-2e-43At2g26460RED family proteinO.I.H.G.S.X.
0.4464.10.981614091_atCD798618hypothetical protein LOC100253367-4e-12At5g25230elongation factor Tu family proteinO.I.H.G.S.X.
0.4361.50.981606771_atCF517362--3e-39At4g00660DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.4260.10.981614002_atBQ794986hypothetical protein LOC100242874-6e-3At2g14835zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4057.70.981612222_atCB349107hypothetical protein LOC100244118-1e-3At1g16560Per1-like family proteinO.I.H.G.S.X.
0.3853.60.981613361_s_atCF211823hypothetical protein LOC100242707-4e-2At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3650.70.981618602_atCD712496hypothetical protein LOC100267246-4e-7At1g79650RAD23O.I.H.G.S.X.
0.3446.80.981615027_s_atCB977478hypothetical protein LOC100246785-1e-15At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3345.70.981613303_atCB977627similar to plectin-related-3e-16At2g26770plectin-relatedO.I.H.G.S.X.
0.3243.10.981618548_atCD798160hypothetical protein LOC100246661-2e-20At2g06990HEN2 (hua enhancer 2)O.I.H.G.S.X.
0.3141.30.981620963_atCF403847hypothetical protein LOC100247592-7e-49At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)O.I.H.G.S.X.
0.2837.70.981606841_s_atCF513194similar to UBC13A/UBC35 (UBIQUITIN-CONJUGATING ENZYME35); protein binding / ubiquitin-protein ligase-1e-62At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.2837.70.981612043_atCF210844hypothetical protein LOC100256975-5e-41At5g62610basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2632.00.981622482_atCF414260hypothetical protein LOC100265772-3e-11At1g76940RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.7GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.189.1GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.088.2GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.886.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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