Co-expression analysis

Gene ID	1607570_at
Gene name
Homology with Arabidopsis	Similar to At1g49110: unknown protein (HF=5e-2)
Module size	14 genes
NF	0.24
%ile	33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.2	0.95	1607570_at	CD799887	-	-	5e-2	At1g49110	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.96	1607768_at	CF201183.1	-	-	4e-13	At3g02710	nuclear associated protein-related / NAP-related	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1616634_x_at	CF207003.1	-	-	4e-2	At1g13635	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.95	1613380_at	CF516797	-	-	4e+0	At3g56290	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1612201_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1611084_at	CA816784	-	-	6e+0	At3g26690	ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1618098_at	CB979528	hypothetical protein LOC100244989	-	8e-1	At5g63135	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1622183_at	CD800964	-	-	4e-1	At1g51330	serpin-related / serine protease inhibitor-related	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1617159_at	CD797901	hypothetical protein LOC100242747	-	2e-1	At2g03780	translin family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.95	1606496_at	CB979201	-	-	1e+0	At3g47410	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1610269_at	CA816861	hypothetical protein LOC100253844	-	4e+0	At4g39890	AtRABH1c (Arabidopsis Rab GTPase homolog H1c)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1619134_at	CB971759	-	-	2e+0	At5g53720	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1618544_at	CB976993	similar to pumilio domain-containing protein PPD1	-	4e-20	At4g25880	APUM6 (Arabidopsis Pumilio 6)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.97	1621139_at	CB982951	hypothetical protein LOC100262947	-	3e-9	At5g08390	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.6	96.0	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.1	89.1	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.0	88.2	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.0	88.2	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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