Co-expression analysis

Gene ID 1607564_at
Gene name UPF0497 membrane protein 4
Homology with ArabidopsisSimilar to At5g41530: - (HF=1e+1)
Module size 7 genes
NF 0.22
%ile 31.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.951607564_atCB350061UPF0497 membrane protein 4-1e+1At5g41530-O.I.H.G.S.X.
0.4464.10.941619823_atCB969271hypothetical protein LOC100261518-1e-4At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3650.70.921614513_atCF414215hypothetical protein LOC100250402-2e-1At2g03550hydrolaseO.I.H.G.S.X.
0.1718.20.941614131_atCF415600hypothetical protein LOC100247551-6e-2At2g36760UGT73C2 (UDP-glucosyl transferase 73C2)O.I.H.G.S.X.
0.1515.60.961613151_atBQ800267hypothetical protein LOC100260721-1e-7At4g27435unknown proteinO.I.H.G.S.X.
0.1414.40.951621041_atBQ794656hypothetical protein LOC100251391-2e-5At4g30200-O.I.H.G.S.X.
0.099.40.951614926_atCF369045--7e-8At2g45630oxidoreductase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.289.9GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436401V. riparia (VR, PI588259) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436405V. riparia (VR, PI588259) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.088.2GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436384Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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