Co-expression analysis

Gene ID	1607541_at
Gene name	hypothetical protein LOC100257913
Homology with Arabidopsis	Similar to At3g13960: AtGRF5 (GROWTH-REGULATING FACTOR 5) (HF=4e-1)
Module size	6 genes
NF	0.18
%ile	27.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.91	1607541_at	CF208308	hypothetical protein LOC100257913	-	4e-1	At3g13960	AtGRF5 (GROWTH-REGULATING FACTOR 5)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.94	1618956_at	CB343141	hypothetical protein LOC100257557	-	7e-5	At5g52250	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.93	1608807_at	CA818025	-	-	2e+0	At1g07960	ATPDIL5-1 (PDI-like 5-1)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1617320_at	CB343024	hypothetical protein LOC100250066	-	8e-3	At2g01610	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.94	1607859_at	CB339590	hypothetical protein LOC100262522	-	2e-2	At4g28290	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.92	1607673_at	CF405158	hypothetical protein LOC100258964	-	2e-60	At5g13630	GUN5 (GENOMES UNCOUPLED 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	99.3	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
5.1	98.1	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.7	96.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.0	94.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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