Co-expression analysis

Gene ID 1607520_at
Gene name hypothetical protein LOC100258931
Homology with ArabidopsisSimilar to At3g27880: unknown protein (HF=1e+0)
Module size 33 genes
NF 0.34
%ile 50.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.901607520_atBQ799108hypothetical protein LOC100258931-1e+0At3g27880unknown proteinO.I.H.G.S.X.
0.5273.90.971618927_atCD716657hypothetical protein LOC100267896-2e+0At3g52880monodehydroascorbate reductase, putativeO.I.H.G.S.X.
0.5072.70.951619860_atCB346857hypothetical protein LOC100250829-1e+0At3g01660methyltransferaseO.I.H.G.S.X.
0.5072.70.971615888_atCA815896hypothetical protein LOC100257865-1e-14At1g08550NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)O.I.H.G.S.X.
0.4564.60.931619560_atCD721168hypothetical protein LOC100247422-2e-6At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.4464.10.951622328_atBQ792670hypothetical protein LOC100264834-3e-32At2g05310unknown proteinO.I.H.G.S.X.
0.4464.10.961617533_atCA818661hypothetical protein LOC100267181-2e-2At2g41120unknown proteinO.I.H.G.S.X.
0.4361.50.971612830_atCD713678hypothetical protein LOC100255118-4e-10At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.
0.4158.70.971615304_atCB341428hypothetical protein LOC100252706-3e-11At4g02790GTP-binding family proteinO.I.H.G.S.X.
0.4158.70.951612272_atCD715200hypothetical protein LOC100264087-5e-71At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.3853.60.971613332_atCF606189hypothetical protein LOC100253198 /// hypothetical protein LOC100265231 /// NAD-malate dehydrogenase-5e-34At5g09660PMDH2 (peroxisomal NAD-malate dehydrogenase 2)O.I.H.G.S.X.
0.3853.60.961616060_atBM436906hypothetical protein LOC100247072-7e-3At3g18870mitochondrial transcription termination factor-related / mTERF-relatedO.I.H.G.S.X.
0.3751.70.951608611_atCF216106hypothetical protein LOC100240873-2e-25At2g48070RPH1 (RESISTANCE TO PHYTOPHTHORA 1)O.I.H.G.S.X.
0.3650.70.951607325_atCD717953hypothetical protein LOC100266735-1e-9At4g25910NFU3O.I.H.G.S.X.
0.3650.70.951613425_atCB344234hypothetical protein LOC100255425-2e-15At5g22800EMB1030 (EMBRYO DEFECTIVE 1030)O.I.H.G.S.X.
0.3650.70.961621887_atBQ796602hypothetical protein LOC100262699-3e-1At4g36850-O.I.H.G.S.X.
0.3446.80.961609724_atCF210650hypothetical protein LOC100255332-1e-4At3g56010unknown proteinO.I.H.G.S.X.
0.3345.70.941617515_atCF514936similar to APX6 (ASCORBATE PEROXIDASE 6); L-ascorbate peroxidase-2e-5At4g32320APX6O.I.H.G.S.X.
0.3243.10.971618597_atCD714494hypothetical protein LOC100244373-3e-1At4g39070zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.3243.10.971621408_atBQ798831hypothetical protein LOC100244724-5e+0Atmg01370-O.I.H.G.S.X.
0.3243.10.971615310_s_atCB341274hypothetical protein LOC100266836-7e-21At5g57170macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.
0.3039.40.961611993_atCA809254hypothetical protein LOC100246866-6e-32At4g35000APX3 (ASCORBATE PEROXIDASE 3)O.I.H.G.S.X.
0.3039.40.941612356_atCF606524hypothetical protein LOC100247067-7e-1At1g35820unknown proteinO.I.H.G.S.X.
0.2937.70.971611324_atCB348704hypothetical protein LOC100263597-4e-7At1g14345oxidoreductaseO.I.H.G.S.X.
0.2837.70.961612275_atCF512634hypothetical protein LOC100253288-4e-13At5g01920STN8O.I.H.G.S.X.
0.2837.70.961612480_atCB971929hypothetical protein LOC100243071-1e-1At1g14150oxygen evolving enhancer 3 (PsbQ) family proteinO.I.H.G.S.X.
0.2530.50.971618750_atCB971031hypothetical protein LOC100241679-2e-50At2g34860EDA3 (embryo sac development arrest 3)O.I.H.G.S.X.
0.2530.50.961617382_s_atBQ799139hypothetical protein LOC100262344-6e-174At1g68010HPRO.I.H.G.S.X.
0.2428.70.961620768_atCB339399hypothetical protein LOC100259668-1e-19At1g04420aldo/keto reductase family proteinO.I.H.G.S.X.
0.2124.00.971611346_atCB003966hypothetical protein LOC100246730-3e-39At1g64355unknown proteinO.I.H.G.S.X.
0.2124.00.961617854_atCF415721hypothetical protein LOC100241596-1e-3At1g15980NDF1 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)O.I.H.G.S.X.
0.2124.00.961614432_atBM437777hypothetical protein LOC100256290-5e-60At2g04270RNEE/G (RNASE E/G-LIKE)O.I.H.G.S.X.
0.1718.20.961619110_atCF404158hypothetical protein LOC100267390-4e-4At2g30170catalyticO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.886.0GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.784.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
1.784.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.784.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.784.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.784.7GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage