Co-expression analysis

Gene ID	1607491_at
Gene name
Homology with Arabidopsis	Similar to At4g10465: metal ion binding (HF=3e+0)
Module size	6 genes
NF	0.68
%ile	93.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.95	1607491_at	CF202496.1	-	-	3e+0	At4g10465	metal ion binding	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.95	1610318_at	CF206018.1	-	-	7e-15	At3g10210	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1616309_at	CF206707.1	-	-	3e-23	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1614842_at	CF205251.1	-	-	5e-10	At1g48830	40S ribosomal protein S7 (RPS7A)	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.95	1606971_at	CF206736.1	-	-	4e-63	At2g44120	60S ribosomal protein L7 (RPL7C)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.95	1618080_at	CF202367.1	-	-	2e+0	At4g28556	RIC7	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
3.0	94.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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