Co-expression analysis

Gene ID 1607463_at
Gene name hypothetical protein LOC100255717
Homology with ArabidopsisSimilar to At3g12203: scpl17 (serine carboxypeptidase-like 17) (HF=1e-12)
Module size 30 genes
NF 0.41
%ile 61.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941607463_atCB343440hypothetical protein LOC100255717-1e-12At3g12203scpl17 (serine carboxypeptidase-like 17)O.I.H.G.S.X.
0.6787.90.951609624_atCK138167.1--2e-27At5g19855unknown proteinO.I.H.G.S.X.
0.6685.10.951618563_atCA817076hypothetical protein LOC100267134-3e-7At2g41040methyltransferase-relatedO.I.H.G.S.X.
0.5679.40.941622209_atCF608497hypothetical protein LOC100254328-6e-39At2g26580YAB5 (YABBY5)O.I.H.G.S.X.
0.5375.20.951620536_atCF200887.1--7e-2At3g496302-oxoacid-dependent oxidase, putativeO.I.H.G.S.X.
0.5173.20.941611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.
0.5072.70.961607271_atBQ800406hypothetical protein LOC100258274-2e-2At3g26070plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4969.30.931607624_atBQ794859hypothetical protein LOC100255131-6e-15At5g12470unknown proteinO.I.H.G.S.X.
0.4868.80.931622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4767.70.941606913_atBQ792407zeaxanthin epoxidase-3e-1At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.
0.4666.50.971614317_atCF201355.1hypothetical protein LOC100245459-2e-2At4g37230oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putativeO.I.H.G.S.X.
0.4361.50.951611595_s_atCB348240hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.4361.50.951615196_atCD714231hypothetical protein LOC100267595-4e-1At5g06650GIS2 (GLABROUS INFLORESCENCE STEMS 2)O.I.H.G.S.X.
0.4361.50.951613941_atCA818531hypothetical protein LOC100251097-2e+0At1g65390ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)O.I.H.G.S.X.
0.4158.70.941609166_atCF517180hypothetical protein LOC100249305-7e-3At3g14630CYP72A9O.I.H.G.S.X.
0.4057.70.951622813_a_atCB348240hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.3954.90.941619741_atCB339880hypothetical protein LOC100259693-4e-50At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.3954.90.961619636_atCB004373hypothetical protein LOC100262988-2e+0At5g28610-O.I.H.G.S.X.
0.3853.60.951619377_atCF372632hypothetical protein LOC100244120-1e-3At3g28940avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putativeO.I.H.G.S.X.
0.3853.60.951612698_a_atCA816858hypothetical protein LOC100242947-1e-32At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.H.G.S.X.
0.3853.60.951622348_s_atCB342797hypothetical protein LOC100248623-1e-34At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.3751.70.951614462_atCB343121--4e-63Atcg00300-O.I.H.G.S.X.
0.3345.70.971616856_atCB340549hypothetical protein LOC100246151-1e-19At1g64430-O.I.H.G.S.X.
0.3243.10.961618865_atCF210609hypothetical protein LOC100254959-4e+0At4g34960peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.
0.3243.10.951621345_x_atCF204350.1--4e+0At4g28703-O.I.H.G.S.X.
0.3141.30.941613645_atCF201766.1hypothetical protein LOC100248623-7e-55At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.2837.70.971615317_atCA809272hypothetical protein LOC100266100-2e-9At3g51510unknown proteinO.I.H.G.S.X.
0.2530.50.951616533_atCB339497hypothetical protein LOC100250997-6e-7At4g32260ATP synthase familyO.I.H.G.S.X.
0.2225.60.961608106_atCB971904hypothetical protein LOC100246732-5e+0At5g47100CBL9O.I.H.G.S.X.
0.2124.00.951607938_atCB343740--2e-11At4g39970haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.886.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.886.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.886.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.784.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
1.784.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.784.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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