Co-expression analysis

Gene ID 1607457_at
Gene name hypothetical protein LOC100256481
Homology with ArabidopsisSimilar to At5g17330: GAD (HF=2e-84)
Module size 9 genes
NF 0.50
%ile 75.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4767.70.961607457_atCB341759hypothetical protein LOC100256481-2e-84At5g17330GADO.I.H.G.S.X.
0.6384.30.981610475_atCB979928hypothetical protein LOC100242577-1e-7At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.5980.60.981606519_atCB342417hypothetical protein LOC100261732-2e-22At5g56950NAP1O.I.H.G.S.X.
0.5577.30.971616360_atCD799611hypothetical protein LOC100262084-8e-2At1g07960ATPDIL5-1 (PDI-like 5-1)O.I.H.G.S.X.
0.5577.30.981619995_atBQ796015hypothetical protein LOC100259910-7e-19At4g36800RCE1 (RUB1 CONJUGATING ENZYME 1)O.I.H.G.S.X.
0.5273.90.971606434_atCB918530similar to glucose-6-phosphate isomerase-7e-40At5g42740glucose-6-phosphate isomerase, cytosolic (PGIC)O.I.H.G.S.X.
0.5072.70.971608601_atBQ800518hypothetical protein LOC100262653-6e-20At1g76150maoC-like dehydratase domain-containing proteinO.I.H.G.S.X.
0.3954.90.971617274_atCF372628hypothetical protein LOC100261092-3e-11At5g11580UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.
0.3548.50.981620143_atBQ794466hypothetical protein LOC100248167-1e+0At4g03290calcium-binding protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.692.5GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.491.3GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.088.2GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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