Co-expression analysis

Gene ID 1607444_at
Gene name hypothetical protein LOC100247182
Homology with ArabidopsisSimilar to At4g20095: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.43
%ile 64.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4767.70.991607444_atBQ798524hypothetical protein LOC100247182-1e+0At4g20095unknown proteinO.I.H.G.S.X.
0.7189.50.991614602_atCB004149hypothetical protein LOC100244335-1e-32At2g47900AtTLP3 (TUBBY LIKE PROTEIN 3)O.I.H.G.S.X.
0.5375.20.991613769_atCB970019hypothetical protein LOC100265267-4e-48At1g51690ATB ALPHAO.I.H.G.S.X.
0.5072.70.991618813_atCB970187hypothetical protein LOC100263840-2e+0At1g69828-O.I.H.G.S.X.
0.3345.70.991620191_atCB968759hypothetical protein LOC100245656-1e+0At3g08636unknown proteinO.I.H.G.S.X.
0.2022.40.991607887_atCF215963hypothetical protein LOC100241008-2e+0At5g50880unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.595.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
3.395.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.194.6GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.793.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.793.0GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage