Co-expression analysis

Gene ID	1607428_at
Gene name	hypothetical protein LOC100268022
Homology with Arabidopsis	Similar to At5g06980: unknown protein (HF=2e-2)
Module size	6 genes
NF	0.21
%ile	30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.95	1607428_at	CD801140	hypothetical protein LOC100268022	-	2e-2	At5g06980	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1619278_at	CB976494	hypothetical protein LOC100260963	-	2e-1	At1g36675	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1607503_s_at	CF515267	hypothetical protein LOC100260521	-	5e-16	At1g28330	DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.95	1610056_s_at	CB341777	hypothetical protein LOC100256876 /// hypothetical protein LOC100261970 /// hypothetical protein LOC100266371	-	8e-3	At5g25280	serine-rich protein-related	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1610473_at	CD008037	hypothetical protein LOC100259805	-	3e-1	At3g10980	unknown protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.94	1609974_at	CB977877	hypothetical protein LOC100267017	-	2e-61	At4g26610	D6PKL1 (D6 PROTEIN KINASE LIKE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.1	96.9	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.3	90.7	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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