Co-expression analysis

Gene ID 1607427_at
Gene name hypothetical protein LOC100253432
Homology with ArabidopsisSimilar to At4g00700: C2 domain-containing protein (HF=1e-5)
Module size 11 genes
NF 0.28
%ile 39.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4868.80.961607427_atCF213911hypothetical protein LOC100253432-1e-5At4g00700C2 domain-containing proteinO.I.H.G.S.X.
0.4361.50.971606933_a_atCB007886--1e-20At1g01360unknown proteinO.I.H.G.S.X.
0.3650.70.971616536_atCF608264hypothetical protein LOC100249974-1e-10At3g08020protein binding / zinc ion bindingO.I.H.G.S.X.
0.2837.70.981616447_atBQ792485hypothetical protein LOC100242721-5e+0At5g25210unknown proteinO.I.H.G.S.X.
0.2734.00.981615704_atCB970180hypothetical protein LOC100253600-9e-5At3g22180zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.2530.50.971618498_atCB008237hypothetical protein LOC100255416-7e-6At5g01980zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2428.70.971606924_a_atCF518716similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-86At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.2327.50.971613435_s_atCK138172.1--7e-1At5g26640unknown proteinO.I.H.G.S.X.
0.2327.50.971617006_atCF514282hypothetical protein LOC100255735-6e-10At4g33350chloroplast inner membrane import protein Tic22, putativeO.I.H.G.S.X.
0.2225.60.981614715_atCB972151hypothetical protein LOC100254787-8e-55At1g20580small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeO.I.H.G.S.X.
0.1920.90.981614475_atCF609346hypothetical protein LOC100263178-9e-18At5g43930transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147679Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation8Link to GEO
2.189.1GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.784.7GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
1.784.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.784.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.784.7GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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