Co-expression analysis

Gene ID	1607291_at
Gene name	hypothetical protein LOC100265661
Homology with Arabidopsis	Similar to At5g52640: ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) (HF=2e-134)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.78	1607291_at	CB007647	hypothetical protein LOC100265661	-	2e-134	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.75	1620348_at	CB347135	hypothetical protein LOC100243757	-	5e-13	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.82	1616049_at	CD005811	-	-	3e-4	At4g13615	four F5 protein-related / 4F5 protein-related	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.90	1610122_at	CF517531	-	-	4e-24	At2g26150	ATHSFA2	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.87	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.85	1622628_at	CB349013	hypothetical protein LOC100244609	-	3e-2	At1g54050	17.4 kDa class III heat shock protein (HSP17.4-CIII)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.7	96.2	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.1	94.6	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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