Co-expression analysis

Gene ID 1607289_at
Gene name hypothetical protein LOC100243734
Homology with ArabidopsisSimilar to At3g29020: MYB110 (myb domain protein 110) (HF=9e-2)
Module size 16 genes
NF 0.38
%ile 56.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.971607289_atCD802115hypothetical protein LOC100243734-9e-2At3g29020MYB110 (myb domain protein 110)O.I.H.G.S.X.
0.5577.30.981606735_atCB970224hypothetical protein LOC100249353-4e+0At3g15420unknown proteinO.I.H.G.S.X.
0.5273.90.981618642_atCF604519hypothetical protein LOC100265629-5e-13At5g51410LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.
0.5072.70.991613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.4361.50.981612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)O.I.H.G.S.X.
0.4158.70.981617131_atCF511594hypothetical protein LOC100242326-2e+0At1g54095unknown proteinO.I.H.G.S.X.
0.3548.50.981615804_atCF403733--4e-2At5g65910BSD domain-containing proteinO.I.H.G.S.X.
0.3446.80.991619715_atCF207152hypothetical protein LOC100243011-5e-39At1g30470SIT4 phosphatase-associated family proteinO.I.H.G.S.X.
0.3446.80.981612431_atCA810329--1e+0At2g16720MYB7 (MYB DOMAIN PROTEIN 7)O.I.H.G.S.X.
0.3345.70.981614287_atCF510757hypothetical protein LOC100243855-1e-16At2g20650zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3345.70.991613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3O.I.H.G.S.X.
0.3345.70.991620763_atBQ792258hypothetical protein LOC100264673-1e-38At5g11560catalyticO.I.H.G.S.X.
0.3141.30.981608374_atCF214105--3e-1At4g03153kinase interacting family proteinO.I.H.G.S.X.
0.3141.30.991619972_atCF511808hypothetical protein LOC100263609-2e-1At5g56770unknown proteinO.I.H.G.S.X.
0.2022.40.981611250_atCB922487hypothetical protein LOC100249628-9e-4At4g24100protein kinase family proteinO.I.H.G.S.X.
0.1920.90.981609191_s_atCB978023hypothetical protein LOC100258056-0At5g26751ATSK11O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.390.7GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.189.1GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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