Co-expression analysis

Gene ID 1607279_at
Gene name hypothetical protein LOC100242386
Homology with ArabidopsisSimilar to At1g64750: ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I)) (HF=4e-1)
Module size 6 genes
NF 0.33
%ile 47.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971607279_atCF212545hypothetical protein LOC100242386-4e-1At1g64750ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))O.I.H.G.S.X.
0.5072.70.981613953_atCF202492.1--3e-2At5g63220unknown proteinO.I.H.G.S.X.
0.3039.40.981609938_atCF515319hypothetical protein LOC100267803-4e-6At3g18640zinc finger protein-relatedO.I.H.G.S.X.
0.2937.70.981609633_s_atCB971333hypothetical protein LOC100254082-3e-1At4g15735SCRL10 (SCR-Like 10)O.I.H.G.S.X.
0.1920.90.981608167_s_atCF414860hypothetical protein LOC100252467-4e-34At5g5667040S ribosomal protein S30 (RPS30C)O.I.H.G.S.X.
0.1616.70.981612905_s_atCB345326hypothetical protein LOC100258381-5e-3At1g12830unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.199.4GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
4.397.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
4.096.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
4.096.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.595.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.194.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.194.6GSM436384Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM436374Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.10951.1.A1_at, orthologous to the query gene, 1607279_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6483.4Gma.10951.1.A1_atAt1g64750--1e-3At5g45010ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)O.I.H.G.S.X.
0.8693.0GmaAffx.88721.1.S1_s_atAt1g64750--5e-12At1g7599026S proteasome regulatory subunit S3, putative (RPN3)O.I.H.G.S.X.
0.8693.0GmaAffx.92455.1.S1_s_atAt1g64750--5e-34At5g42790PAF1O.I.H.G.S.X.
0.7790.3GmaAffx.91569.1.S1_s_atAt1g64750--7e-52At1g21720PBC1 (PROTEASOME BETA SUBUNIT C1)O.I.H.G.S.X.
0.7489.2Gma.13142.2.S1_a_atAt1g64750--2e-13At5g15220ribosomal protein L27 family proteinO.I.H.G.S.X.
0.7388.9GmaAffx.91235.1.S1_s_atAt1g64750--8e-45At4g31300PBA1O.I.H.G.S.X.
0.6786.1Gma.4344.2.S1_a_atAt1g64750--1e-79At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.6483.4Gma.17539.2.S1_s_atAt1g64750proteasome IOTA subunit-1e-36At5g35590PAA1 (PROTEASOME ALPHA SUBUNIT A 1)O.I.H.G.S.X.
0.6382.9Gma.5810.2.S1_a_atAt1g64750--2e-79At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.6080.7GmaAffx.90062.1.S1_s_atAt1g64750--1e-108At1g53750RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)O.I.H.G.S.X.
0.5071.7GmaAffx.46538.1.S1_s_atAt1g64750ribosomal protein S13-2e-10At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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