Co-expression analysis

Gene ID 1607279_at
Gene name hypothetical protein LOC100242386
Homology with ArabidopsisSimilar to At1g64750: ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I)) (HF=4e-1)
Module size 6 genes
NF 0.33
%ile 47.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971607279_atCF212545hypothetical protein LOC100242386-4e-1At1g64750ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))O.I.H.G.S.X.
0.5072.70.981613953_atCF202492.1--3e-2At5g63220unknown proteinO.I.H.G.S.X.
0.3039.40.981609938_atCF515319hypothetical protein LOC100267803-4e-6At3g18640zinc finger protein-relatedO.I.H.G.S.X.
0.2937.70.981609633_s_atCB971333hypothetical protein LOC100254082-3e-1At4g15735SCRL10 (SCR-Like 10)O.I.H.G.S.X.
0.1920.90.981608167_s_atCF414860hypothetical protein LOC100252467-4e-34At5g5667040S ribosomal protein S30 (RPS30C)O.I.H.G.S.X.
0.1616.70.981612905_s_atCB345326hypothetical protein LOC100258381-5e-3At1g12830unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.199.4GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
4.397.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
4.096.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
4.096.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.595.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.194.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.194.6GSM436384Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM436374Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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