Co-expression analysis

Gene ID	1607220_at
Gene name	hypothetical protein LOC100244846
Homology with Arabidopsis	Similar to At5g01850: protein kinase, putative (HF=4e-48)
Module size	6 genes
NF	0.33
%ile	47.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.97	1607220_at	CF513372	hypothetical protein LOC100244846	-	4e-48	At5g01850	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1613071_at	CB975511	-	-	5e+0	At5g42070	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.97	1609490_s_at	CK138152.1	hypothetical protein LOC100267319	-	6e-9	At4g24760	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1614846_at	CD800968	hypothetical protein LOC100249543	-	4e+0	At3g12960	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1606720_at	CD800244	hypothetical protein LOC100253703	-	8e-111	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.98	1613281_at	CF513460	hypothetical protein LOC100249314	-	4e-33	At3g22440	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
5.8	98.6	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
5.2	98.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
4.3	97.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
4.1	96.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.0	96.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.3	95.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.2	94.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.1	94.6	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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