Co-expression analysis

Gene ID 1607220_at
Gene name hypothetical protein LOC100244846
Homology with ArabidopsisSimilar to At5g01850: protein kinase, putative (HF=4e-48)
Module size 6 genes
NF 0.33
%ile 47.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.971607220_atCF513372hypothetical protein LOC100244846-4e-48At5g01850protein kinase, putativeO.I.H.G.S.X.
0.6081.90.971613071_atCB975511--5e+0At5g42070unknown proteinO.I.H.G.S.X.
0.5577.30.971609490_s_atCK138152.1hypothetical protein LOC100267319-6e-9At4g24760unknown proteinO.I.H.G.S.X.
0.2734.00.981614846_atCD800968hypothetical protein LOC100249543-4e+0At3g12960unknown proteinO.I.H.G.S.X.
0.1819.40.981606720_atCD800244hypothetical protein LOC100253703-8e-111At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.1616.70.981613281_atCF513460hypothetical protein LOC100249314-4e-33At3g22440hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.098.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
5.898.6GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
5.298.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
4.397.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
4.196.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
4.096.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
3.395.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.294.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.294.9GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.194.6GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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