Co-expression analysis

Gene ID 1607184_at
Gene name hypothetical protein LOC100258938
Homology with ArabidopsisSimilar to At4g00750: dehydration-responsive family protein (HF=8e-24)
Module size 23 genes
NF 0.44
%ile 66.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8895.40.891607184_atCB981964hypothetical protein LOC100258938-8e-24At4g00750dehydration-responsive family proteinO.I.H.G.S.X.
0.5679.40.901617012_atCD802399hypothetical protein LOC100252609-1e-17At5g25190ethylene-responsive element-binding protein, putativeO.I.H.G.S.X.
0.5679.40.921620347_atCA814065hypothetical protein LOC100245312-1e-13At3g10320transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.5679.40.951621034_atCF406031hypothetical protein LOC100244738 /// similar to phosphoenolpyruvate carboxykinase /// hypothetical protein LOC100257809-4e-110At4g37870PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)O.I.H.G.S.X.
0.5679.40.961607883_atCB969241hypothetical protein LOC100255480-5e+0At5g49215glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.
0.5072.70.911606879_atBQ799030hypothetical protein LOC100257455-1e-7At2g2771060S acidic ribosomal protein P2 (RPP2B)O.I.H.G.S.X.
0.5072.70.921614863_atCF209845hypothetical protein LOC100251857-4e+0Atcg00710-O.I.H.G.S.X.
0.5072.70.941608366_atCB981300hypothetical protein LOC100250312-1e+0At5g12230unknown proteinO.I.H.G.S.X.
0.4868.80.961621490_atCF212781hypothetical protein LOC100256024-4e-3At5g48350nucleic acid bindingO.I.H.G.S.X.
0.4767.70.921615257_atCB972713hexose transporter-like-6e-12At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.4666.50.941610428_atCD012983hypothetical protein LOC100263040-2e-4At1g32090early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.
0.4564.60.941607476_atCB978990hypothetical protein LOC100258727-4e-14At3g08860alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putativeO.I.H.G.S.X.
0.4158.70.941607967_atCB009400hypothetical protein LOC100261140-4e-1At3g24860hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4057.70.941612363_atBQ800625hypothetical protein LOC100262328-1e-28At3g58060cation efflux family protein / metal tolerance protein, putative (MTPc3)O.I.H.G.S.X.
0.4057.70.971622096_atBQ793294hypothetical protein LOC100243077-4e+0At3g21490copper-binding family proteinO.I.H.G.S.X.
0.3853.60.941611309_atCF210457hypothetical protein LOC100255535-5e+0At3g03900adenylylsulfate kinase, putativeO.I.H.G.S.X.
0.3853.60.941609429_atCB917600hypothetical protein LOC100255607-7e-9At4g25433peptidoglycan-binding LysM domain-containing proteinO.I.H.G.S.X.
0.3853.60.961618401_atCF210173hypothetical protein LOC100255480-6e-19At2g47010unknown proteinO.I.H.G.S.X.
0.3853.60.941619862_atCB979196hypothetical protein LOC100251016-3e-1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeO.I.H.G.S.X.
0.3853.60.941614444_atCF517160hypothetical protein LOC100248687-1e+0At1g49650cell death associated protein-relatedO.I.H.G.S.X.
0.3548.50.921615255_atCF405695--4e+0At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.3345.70.901615630_atCD798495hypothetical protein LOC100250058-4e-1At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.2837.70.891618595_atBQ798258hypothetical protein LOC100248440-5e-1At4g10950GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.692.5GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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