Co-expression analysis

Gene ID 1607154_at
Gene name hypothetical protein LOC100266477
Homology with ArabidopsisSimilar to At5g18420: unknown protein (HF=6e-5)
Module size 9 genes
NF 0.56
%ile 82.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4868.80.991607154_atCA812228hypothetical protein LOC100266477-6e-5At5g18420unknown proteinO.I.H.G.S.X.
0.7691.50.991619569_atCF211443hypothetical protein LOC100250036-2e-30At2g26590adhesion regulating molecule familyO.I.H.G.S.X.
0.6183.20.991613231_atCF210634hypothetical protein LOC100257518-4e-88At5g20890chaperonin, putativeO.I.H.G.S.X.
0.5879.80.991619414_atCF607341hypothetical protein LOC100241708-1e-8At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.5779.80.991614817_atCB970028hypothetical protein LOC100267905-2e-12At4g33060peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.5375.20.991615074_atBQ794896hypothetical protein LOC100254966-3e-35At1g51710UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)O.I.H.G.S.X.
0.4868.80.991620109_s_atBQ796928hypothetical protein LOC100243583-2e+0At3g57930unknown proteinO.I.H.G.S.X.
0.4464.10.991607141_atCD712648hypothetical protein LOC100254376-1e-77At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)O.I.H.G.S.X.
0.4361.50.991612909_atCF404929hypothetical protein LOC100264659-3e-8At3g28970AAR3 (antiauxin-resistant 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
1.987.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.683.3GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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