Co-expression analysis

Gene ID 1606948_at
Gene name hypothetical protein LOC100266705
Homology with ArabidopsisSimilar to At1g74530: unknown protein (HF=2e-2)
Module size 6 genes
NF 0.51
%ile 75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.951606948_atCF404230hypothetical protein LOC100266705-2e-2At1g74530unknown proteinO.I.H.G.S.X.
0.7390.80.961614812_s_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.6787.90.961608397_atCB971352hypothetical protein LOC100250547-4e+0At3g26420ATRZ-1AO.I.H.G.S.X.
0.6081.90.951622345_atCB970837hypothetical protein LOC100266705-3e-14At1g73050(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putativeO.I.H.G.S.X.
0.4057.70.951613602_atCF513870hypothetical LOC100254354-8e+0At5g02470DPAO.I.H.G.S.X.
0.2124.00.961608211_atCD798213hypothetical protein LOC100247578-6e+0At3g55490-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147679Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation8Link to GEO
2.491.3GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.491.3GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14Link to GEO
2.289.9GSM147698Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation27Link to GEO
2.189.1GSM147703Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation32Link to GEO
2.088.2GSM147697Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation26Link to GEO
1.987.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO
1.987.2GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
1.987.2GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.2042.2.S1_at, orthologous to the query gene, 1606948_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.2042.2.S1_atAt1g74530--3e+0At4g10170synaptobrevin-related family proteinO.I.H.G.S.X.
0.4048.5Zm.4044.2.S1_atAt1g74530--2e+0At5g13780GCN5-related N-acetyltransferase, putativeO.I.H.G.S.X.
0.3641.3Zm.19135.1.A1_atAt1g74530--2e-1At3g17730anac057 (Arabidopsis NAC domain containing protein 57)O.I.H.G.S.X.
0.2928.1Zm.16687.1.S1_atAt1g74530hypothetical protein LOC100194066-3e-3At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.072.9Zm.12842.1.A1_atAt1g74530hydroxyacid oxidase 1-1e-2At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.041.5Zm.8362.1.A1_atAt1g74530elongin C-2e-3At5g59140SKP1 family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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