Co-expression analysis

Gene ID	1606948_at
Gene name	hypothetical protein LOC100266705
Homology with Arabidopsis	Similar to At1g74530: unknown protein (HF=2e-2)
Module size	6 genes
NF	0.51
%ile	75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.95	1606948_at	CF404230	hypothetical protein LOC100266705	-	2e-2	At1g74530	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1614812_s_at	CF372270	hypothetical protein LOC100265283	-	2e-27	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.96	1608397_at	CB971352	hypothetical protein LOC100250547	-	4e+0	At3g26420	ATRZ-1A	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.95	1622345_at	CB970837	hypothetical protein LOC100266705	-	3e-14	At1g73050	(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1613602_at	CF513870	hypothetical LOC100254354	-	8e+0	At5g02470	DPA	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1608211_at	CD798213	hypothetical protein LOC100247578	-	6e+0	At3g55490	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.4	91.3	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.4	91.3	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.2	89.9	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27
2.1	89.1	GSM147703	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	32
2.0	88.2	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
1.9	87.2	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
1.9	87.2	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
1.9	87.2	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
1.9	87.2	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9

Inter-species module comparison

A co-expression module including the maize gene, Zm.2042.2.S1_at, orthologous to the query gene, 1606948_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	Zm.2042.2.S1_at	At1g74530	-	-	3e+0	At4g10170	synaptobrevin-related family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	Zm.4044.2.S1_at	At1g74530	-	-	2e+0	At5g13780	GCN5-related N-acetyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.36	41.3	Zm.19135.1.A1_at	At1g74530	-	-	2e-1	At3g17730	anac057 (Arabidopsis NAC domain containing protein 57)	O.I.	H.G.	S.X.	Please select
0.29	28.1	Zm.16687.1.S1_at	At1g74530	hypothetical protein LOC100194066	-	3e-3	At5g07250	ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.07	2.9	Zm.12842.1.A1_at	At1g74530	hydroxyacid oxidase 1	-	1e-2	At3g14415	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	O.I.	H.G.	S.X.	Please select
0.04	1.5	Zm.8362.1.A1_at	At1g74530	elongin C	-	2e-3	At5g59140	SKP1 family protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

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