Co-expression analysis

Gene ID 1606948_at
Gene name hypothetical protein LOC100266705
Homology with ArabidopsisSimilar to At1g74530: unknown protein (HF=2e-2)
Module size 6 genes
NF 0.51
%ile 75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.951606948_atCF404230hypothetical protein LOC100266705-2e-2At1g74530unknown proteinO.I.H.G.S.X.
0.7390.80.961614812_s_atCF372270hypothetical protein LOC100265283-2e-27At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.6787.90.961608397_atCB971352hypothetical protein LOC100250547-4e+0At3g26420ATRZ-1AO.I.H.G.S.X.
0.6081.90.951622345_atCB970837hypothetical protein LOC100266705-3e-14At1g73050(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putativeO.I.H.G.S.X.
0.4057.70.951613602_atCF513870hypothetical LOC100254354-8e+0At5g02470DPAO.I.H.G.S.X.
0.2124.00.961608211_atCD798213hypothetical protein LOC100247578-6e+0At3g55490-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147679Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation8Link to GEO
2.491.3GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.491.3GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14Link to GEO
2.289.9GSM147698Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation27Link to GEO
2.189.1GSM147703Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation32Link to GEO
2.088.2GSM147697Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation26Link to GEO
1.987.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO
1.987.2GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
1.987.2GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig10826_at, orthologous to the query gene, 1606948_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7489.1Contig10826_atAt1g74530--3e-2At1g59800cullin-relatedO.I.H.G.S.X.
0.6178.7Contig6020_atAt1g74530--5e-5At3g50670U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)O.I.H.G.S.X.
0.3849.5Contig12304_atAt1g74530--1e-2At3g25580thioredoxin-relatedO.I.H.G.S.X.
0.3545.1Contig12241_atAt1g74530--9e+0At5g44550integral membrane family proteinO.I.H.G.S.X.
0.3240.3Contig9039_atAt1g74530--1e-2At1g49730protein kinase family proteinO.I.H.G.S.X.
0.2935.5Contig2799_atAt1g74530--9e-41At2g30970ASP1 (ASPARTATE AMINOTRANSFERASE 1)O.I.H.G.S.X.
0.2732.1Contig12838_atAt1g74530--4e-3At5g18070DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101)O.I.H.G.S.X.
0.2326.1Contig11318_atAt1g74530--7e-40At5g20020RAN2O.I.H.G.S.X.
0.1514.1Contig10471_atAt1g74530--2e+0At4g29030glycine-rich proteinO.I.H.G.S.X.
0.1311.6Contig22918_atAt1g74530--3e-1At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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