Co-expression analysis

Gene ID	1606933_a_at
Gene name
Homology with Arabidopsis	Similar to At1g01360: unknown protein (HF=1e-20)
Module size	6 genes
NF	0.45
%ile	67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1606933_a_at	CB007886	-	-	1e-20	At1g01360	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.97	1618481_at	CF213085	hypothetical protein LOC100266840	-	1e-13	At1g65320	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1616802_s_at	CF200896.1	-	-	2e+0	At2g43060	transcription factor	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1617158_at	CB920605	hypothetical protein LOC100251931	-	4e-17	At5g19630	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1612828_at	BQ799707	hypothetical protein LOC100241128	-	3e-14	At3g60340	palmitoyl protein thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.97	1617006_at	CF514282	hypothetical protein LOC100255735	-	6e-10	At4g33350	chloroplast inner membrane import protein Tic22, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.6	92.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.5	91.9	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.5	91.9	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.3	90.7	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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