Co-expression analysis

Gene ID	1606923_s_at
Gene name	hypothetical protein LOC100255239
Homology with Arabidopsis	Similar to At1g64850: calcium-binding EF hand family protein (HF=7e-6)
Module size	6 genes
NF	0.13
%ile	21.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.95	1606923_s_at	CB344818	hypothetical protein LOC100255239	-	7e-6	At1g64850	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.96	1608523_at	CB339561	hypothetical protein LOC100253981	-	4e+0	At5g14340	AtMYB40 (myb domain protein 40)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1614949_x_at	CF202459.1	-	-	3e-3	At1g01100	60S acidic ribosomal protein P1 (RPP1A)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1611197_at	CA812412	hypothetical protein LOC100259765	-	4e-16	At1g78895	-	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.96	1615292_at	CF214583	similar to oligopeptidase A	-	1e-37	At5g10540	peptidase M3 family protein / thimet oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.96	1609313_at	CF403611	similar to 2-oxo acid dehydrogenase, lipoyl-binding site	-	6e-2	At4g22320	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.3	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
4.4	97.3	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
4.2	97.1	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.2	94.9	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
3.1	94.6	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
3.0	94.2	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.8	93.4	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.5	91.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.4	91.3	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.3	90.7	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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