Co-expression analysis

Gene ID	1606919_at
Gene name
Homology with Arabidopsis	Similar to At3g14620: CYP72A8 (HF=6e-3)
Module size	6 genes
NF	0.35
%ile	51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.89	1606919_at	CB342051	-	-	6e-3	At3g14620	CYP72A8	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.88	1619578_at	CB342051	hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392	-	6e-3	At3g14620	CYP72A8	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.91	1614381_at	CD713830	-	-	9e+0	At5g54930	AT hook motif-containing protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.89	1609184_at	CB342124	hypothetical protein LOC100254366	-	7e-6	At3g14640	CYP72A10	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.91	1618484_at	CD719900	-	-	6e+0	At5g63870	PP7 (SERINE/THREONINE PHOSPHATASE 7)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.90	1619786_at	CA814509	-	-	1e-22	At5g43850	ARD4	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.2	89.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.0	88.2	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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