Co-expression analysis

Gene ID 1606868_at
Gene name hypothetical protein LOC100267516
Homology with ArabidopsisSimilar to At4g27720: - (HF=1e-44)
Module size 9 genes
NF 0.17
%ile 25.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.961606868_atCF214473hypothetical protein LOC100267516-1e-44At4g27720-O.I.H.G.S.X.
0.3853.60.961622721_atCF214391hypothetical protein LOC100267516-2e-88At4g27720-O.I.H.G.S.X.
0.2428.70.971617920_atCF609275hypothetical protein LOC100251815-7e-40At5g49720ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)O.I.H.G.S.X.
0.2225.60.981609761_a_atCD800010hypothetical protein LOC100262783-3e-7At5g50375CPI1 (CYCLOPROPYL ISOMERASE)O.I.H.G.S.X.
0.1414.40.981610500_atCB976882hypothetical protein LOC100255820-2e-78At4g00740dehydration-responsive protein-relatedO.I.H.G.S.X.
0.1313.30.981615743_s_atCF513214hypothetical protein LOC100255820-7e-5At4g00740dehydration-responsive protein-relatedO.I.H.G.S.X.
0.1111.30.961619274_atCD718648similar to BY-2 kinesin-like protein 10-3e-1At3g17152enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.099.40.98AFFX-Vvi-actin-M_s_atactin 1--O.I.H.G.S.X.
0.066.80.981607660_atCA812263similar to ribosomal protein L17-6e-80At1g0448060S ribosomal protein L23 (RPL23A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.784.7GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.784.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.784.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.683.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.683.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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