Co-expression analysis

Gene ID	1606852_at
Gene name
Homology with Arabidopsis	Similar to At3g03480: CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) (HF=3e-5)
Module size	8 genes
NF	0.27
%ile	37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.92	1606852_at	CF415037	-	-	3e-5	At3g03480	CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.94	1610470_at	CF202637.1	-	-	1e-7	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.94	1614261_at	CD717598	-	-	1e+0	At4g23885	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.95	1619188_at	CF204375.1	-	-	2e+0	At1g48940	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.94	1614154_at	CF568802	-	-	7e-8	At1g72440	EDA25 (embryo sac development arrest 25)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.93	1610557_at	CF204465.1	-	-	2e-18	At1g53320	AtTLP7 (TUBBY LIKE PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.92	1614538_at	AY427198.1	-	-	2e-1	At3g46760	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	98.6	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.4	98.3	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.8	97.8	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.7	97.7	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.6	97.6	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.4	97.3	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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