Co-expression analysis

Gene ID 1606846_at
Gene name hypothetical LOC100265761
Homology with ArabidopsisSimilar to At3g19010: oxidoreductase, 2OG-Fe(II) oxygenase family protein (HF=3e-5)
Module size 6 genes
NF 0.45
%ile 67.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.931606846_atCB005417hypothetical LOC100265761-3e-5At3g19010oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4666.50.911622622_a_atCA808699similar to peptidase S41 family protein-2e-12At3g57680peptidase S41 family proteinO.I.H.G.S.X.
0.4057.70.941619267_atCB977052hypothetical protein LOC100267479-1e-46At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.4057.70.951607566_s_atCF200894.1hypothetical protein LOC100267479-3e-20At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.3853.60.941617120_s_atCF208320hypothetical protein LOC100265095-1e+0At4g18593dual specificity protein phosphatase-relatedO.I.H.G.S.X.
0.3548.50.941608458_atCB035896hypothetical protein LOC100263954-2e-44At5g10730binding / catalytic/ coenzyme bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.298.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.997.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
4.697.6GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.996.6GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO
3.896.4GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.696.0GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
3.495.5GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.294.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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