Co-expression analysis

Gene ID	1606814_at
Gene name	hypothetical protein LOC100246736
Homology with Arabidopsis	Similar to At5g60020: LAC17 (laccase 17) (HF=1e-12)
Module size	6 genes
NF	0.28
%ile	39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.95	1606814_at	CF372213	hypothetical protein LOC100246736	-	1e-12	At5g60020	LAC17 (laccase 17)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.95	1606524_at	CB979170	hypothetical protein LOC100266440	-	2e-19	At3g01810	-	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1620603_at	CF515961	hypothetical protein LOC100256346	-	2e-43	At3g55760	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.94	1613318_at	BQ799524	sucrose responsive element binding protein	-	2e-10	At4g37260	MYB73 (MYB DOMAIN PROTEIN 73)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1610669_at	CF208675	hypothetical protein LOC100259403	-	6e-2	At1g69825	-	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.95	1622787_at	CF607318	hypothetical protein LOC100244878	-	4e-19	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.7	93.0	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.6	92.5	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.3	90.7	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.2	89.9	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.2	89.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.0	88.2	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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