Co-expression analysis

Gene ID 1606753_at
Gene name hypothetical protein LOC100267198
Homology with ArabidopsisSimilar to At4g05160: 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative (HF=2e-23)
Module size 24 genes
NF 0.25
%ile 35.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.961606753_atCF403699hypothetical protein LOC100267198-2e-23At4g051604-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putativeO.I.H.G.S.X.
0.3954.90.971621577_s_atCF209177hypothetical protein LOC100252109-1e-78At5g47540bindingO.I.H.G.S.X.
0.3954.90.981620612_s_atCF208882similar to ADP-ribosylation factor-4e-128At2g47170ARF1A1CO.I.H.G.S.X.
0.3853.60.971607515_atCF517677hypothetical protein LOC100245573-9e-46At5g11500unknown proteinO.I.H.G.S.X.
0.3853.60.981617002_atCB971115--1e+0At1g06500unknown proteinO.I.H.G.S.X.
0.3853.60.981610080_atCF513601hypothetical protein LOC100266617-5e-19At1g56420unknown proteinO.I.H.G.S.X.
0.3243.10.971621189_atBQ793238--2e-5At5g07120SNX2b (SORTING NEXIN 2b)O.I.H.G.S.X.
0.3141.30.981615020_atCF215189hypothetical protein LOC100255532-1e+0At3g1125060S acidic ribosomal protein P0 (RPP0C)O.I.H.G.S.X.
0.3039.40.971618819_atCF373740hypothetical protein LOC100255504-4e+0At3g28070nodulin MtN21 family proteinO.I.H.G.S.X.
0.2837.70.971611433_atCB972201hypothetical protein LOC100254347-1e-4At4g13270unknown proteinO.I.H.G.S.X.
0.2530.50.971613529_atCF214571hypothetical protein LOC100260925-4e+0At5g37520unknown proteinO.I.H.G.S.X.
0.2530.50.981608765_atCB980590hypothetical protein LOC100243711-1e-10At3g51010unknown proteinO.I.H.G.S.X.
0.2530.50.971610260_atCF215252hypothetical protein LOC100248375-1e-14At1g07080gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinO.I.H.G.S.X.
0.2428.70.971616909_atBQ796600similar to oxysterol-binding family protein-5e-32At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)O.I.H.G.S.X.
0.2124.00.981610167_atCF403642hypothetical protein LOC100254398-4e-12At5g14220HEMG2O.I.H.G.S.X.
0.2124.00.981615530_s_atCF201449.1hypothetical protein LOC100256412-6e-9At2g39960microsomal signal peptidase 25 kDa subunit, putative (SPC25)O.I.H.G.S.X.
0.1920.90.981607180_atCA816204hypothetical protein LOC100266111-1e-56At3g50000CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)O.I.H.G.S.X.
0.1819.40.981621969_s_atCB349073hypothetical protein LOC100263646-3e-45At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.1819.40.981613457_s_atCF211789hypothetical protein LOC100248919-6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.1718.20.981620279_atCB923067hypothetical protein LOC100255680-1e+0At3g06870proline-rich family proteinO.I.H.G.S.X.
0.1515.60.981615514_s_atCF518509hypothetical protein LOC100241557-1e-20At5g47120ATBI1 (BAX INHIBITOR 1)O.I.H.G.S.X.
0.1414.40.981610315_atBQ792398hypothetical protein LOC100261361-9e-21At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.
0.1111.30.981616240_atCB348416hypothetical protein LOC100263190-2e-2At3g05760nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.1010.30.981611403_atCF403231hypothetical protein LOC100241204-2e+0At4g22310unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.390.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
1.987.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.987.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.987.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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