Co-expression analysis

Gene ID	1606725_at
Gene name
Homology with Arabidopsis	Similar to At3g47180: zinc finger (C3HC4-type RING finger) family protein (HF=2e+0)
Module size	6 genes
NF	0.03
%ile	7.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.78	1606725_at	CB342959	-	-	2e+0	At3g47180	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.95	1617998_at	BQ797178	R2R3 Myb transcription factor C2 repressor motif protein	-	6e-4	At2g16720	MYB7 (MYB DOMAIN PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.94	1607070_at	CB347331	hypothetical protein LOC100252611	-	5e-32	At5g15450	CLPB3 (CASEIN LYTIC PROTEINASE B3)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.96	1614622_at	CB910360	hypothetical protein LOC100258256	-	3e-2	At4g17090	CT-BMY (CHLOROPLAST BETA-AMYLASE)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1619308_at	BQ795842	hypothetical protein LOC100251904 /// hypothetical protein LOC100248513	-	4e-13	At4g13010	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1607488_at	CF373706	hypothetical protein LOC100245682	-	1e+0	At3g06985	LCR44 (Low-molecular-weight cysteine-rich 44)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.7	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
3.8	96.4	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.4	95.5	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.9	93.8	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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