Co-expression analysis

Gene ID 1606661_at
Gene name hypothetical protein LOC100246447
Homology with ArabidopsisSimilar to At5g08050: - (HF=2e+0)
Module size 10 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.981606661_atCD004606hypothetical protein LOC100246447-2e+0At5g08050-O.I.H.G.S.X.
0.6183.20.981619145_s_atCB969125hypothetical protein LOC100250496-6e-36At2g27050EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1)O.I.H.G.S.X.
0.5679.40.991613738_atCB343644hypothetical protein LOC100265879-6e-1At3g25420scpl21 (serine carboxypeptidase-like 21)O.I.H.G.S.X.
0.5679.40.991611483_atCF207449hypothetical protein LOC100253154-7e+0Atmg00320-O.I.H.G.S.X.
0.5577.30.991615901_atCF405787hypothetical protein LOC100248277-5e+0At4g13075RALFL30 (RALF-LIKE 30)O.I.H.G.S.X.
0.5273.90.981615632_a_atCB977610hypothetical protein LOC100262698-3e-13At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.5173.20.991613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1O.I.H.G.S.X.
0.5072.70.991609716_atCA810704hypothetical protein LOC100265922-3e-1At2g21210auxin-responsive protein, putativeO.I.H.G.S.X.
0.5072.70.991607726_atCB349094hypothetical protein LOC100262331-8e-25At4g34100protein binding / zinc ion bindingO.I.H.G.S.X.
0.3954.90.991617845_atCD800649hypothetical protein LOC100263968-4e-35At2g38630-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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