Co-expression analysis

Gene ID 1606659_s_at
Gene name hypothetical protein LOC100244564
Homology with ArabidopsisSimilar to At1g29280: WRKY65 (HF=2e-19)
Module size 8 genes
NF 0.30
%ile 42.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4057.70.931606659_s_atCF210179hypothetical protein LOC100244564-2e-19At1g29280WRKY65O.I.H.G.S.X.
0.4868.80.921614506_atCD801364hypothetical protein LOC100241962-1e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.4057.70.951617328_atCF214435hypothetical protein LOC100247950-8e-43At4g36750quinone reductase family proteinO.I.H.G.S.X.
0.3548.50.931610591_atCB923320hypothetical protein LOC100251627-1e-5At2g46370JAR1 (JASMONATE RESISTANT 1)O.I.H.G.S.X.
0.2734.00.951613676_atCB002629hypothetical protein LOC100266011-4e+0At3g19200unknown proteinO.I.H.G.S.X.
0.2428.70.931615815_atCF207323similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)-5e-23At3g49290ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2)O.I.H.G.S.X.
0.2225.60.931622786_atCF207035.1hypothetical protein LOC100246765-2e-8At5g61210SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)O.I.H.G.S.X.
0.1718.20.931621277_atCF369061hypothetical protein LOC100252641-2e-24At1g72820mitochondrial substrate carrier family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.696.0GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.094.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.993.8GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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