Co-expression analysis

Gene ID 1606566_at
Gene name hypothetical protein LOC100252008
Homology with ArabidopsisSimilar to At4g38840: auxin-responsive protein, putative (HF=1e-12)
Module size 12 genes
NF 0.34
%ile 50.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.00.911606566_atCF211641hypothetical protein LOC100252008-1e-12At4g38840auxin-responsive protein, putativeO.I.H.G.S.X.
0.4767.70.931611639_atCB976306--4e+0At4g05590unknown proteinO.I.H.G.S.X.
0.4464.10.961619157_atAF359521.1inward rectifying shaker-like K+ channel-3e-66At4g18290KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)O.I.H.G.S.X.
0.4057.70.961618563_atCA817076hypothetical protein LOC100267134-3e-7At2g41040methyltransferase-relatedO.I.H.G.S.X.
0.3954.90.951622209_atCF608497hypothetical protein LOC100254328-6e-39At2g26580YAB5 (YABBY5)O.I.H.G.S.X.
0.3751.70.951620398_atCA810891hypothetical LOC100263767-1e-3At3g09690hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.3141.30.931619741_atCB339880hypothetical protein LOC100259693-4e-50At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.2937.70.961622682_atCB001944hypothetical protein LOC100256501-2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.2530.50.941612382_atCB978155--2e-1At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.2530.50.961607463_atCB343440hypothetical protein LOC100255717-1e-12At3g12203scpl17 (serine carboxypeptidase-like 17)O.I.H.G.S.X.
0.1515.60.931610957_atCF207187hypothetical protein LOC100241474-4e+0At4g09320NDPK1O.I.H.G.S.X.
0.1212.10.941615434_atCB973471hypothetical protein LOC100257403-1e+0At5g04620ATBIOF (BIOTIN F)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.289.9GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.088.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.987.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.987.2GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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